Molecular modeling of the 2-(pyridin-2-yl)-1H-benzimidazole intramolecular dynamics

Автор: Raksha Elena Vladimirovna, Eresko Aleksandr Borisovich, Berestneva Yuliya Vasilyevna, Muratov Aleksey Viktorovich, Zaikov Gennadiy Efremovich

Журнал: НБИ технологии @nbi-technologies

Рубрика: Технико-технологические инновации

Статья в выпуске: 4 (19), 2015 года.

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The results of the DFT and MP2 theoretical investigation of 2-(pyridin-2-yl)- 1H-benzimidazole intramolecular dynamics are presented. The structural parameters of 2-(pyridin- 2-yl)-1H-benzimidazole conformers were obtained by these methods; barriers of internal rotation were estimated. GIAO-calculated NMR chemical shifts (1H and 13C) as obtained at various computational levels are reported for the 2-(pyridin-2-yl)-1H-benzimidazole conformers. The comparative analysis of experimental and computer NMR spectroscopy results revealed that the GIAO method with B3LYP/6-31G(d,p) level of theory and the PCM approach can be used to estimate the NMR 1H and 13C spectra parameters of the 2-(pyridin-2-yl)-1H-benzimidazole.

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Intramolecular dynamics, 2-(pyridin-2-yl)-1h-benzimidazole, chemical shift, magnetic shielding constant, giao, molecular modeling

Короткий адрес: https://sciup.org/14968410

IDR: 14968410   |   DOI: 10.15688/jvolsu10.2015.4.5

Список литературы Molecular modeling of the 2-(pyridin-2-yl)-1H-benzimidazole intramolecular dynamics

  • Chen W., Xi C., Wu Y. Highly Active PD (II) Catalysts With Pyridyl Benzoimidazole Ligands for the Heck Reaction. Journal of Organometallic Chemistry, 2007, vol. 692, pp. 4381-4388.
  • Cossi M., Scalmani G., Rega N., Barone V. New Developments in the Polarizable Continuum Model for Quantum Mechanical and Classical Calculations on Molecules in Solution. J. Chem. Phys., 2002, vol. 117, pp. 43-54.
  • Das S., Guha S., Banerjee A. 2-(2′-Pyridyl) Benzimidazole Based Co (II) Complex as an Efficient Fluorescent Probe for Trace Level Determination of Aspartic and Glutamic Acid in Aqueous Solution: A Displacement Approach. Org. Biomol. Chem., 2011, vol. 9, pp. 7097-7104.
  • Frisch M. J., et al. Gaussian 09, Revision B.01. Gaussian, Inc., Wallingford CT, 2010.
  • Guin M., Maity S., Patwari G.N. Infrared-Optical Double Resonance Spectroscopic Measurements on 2-(2′-Pyridyl) Benzimidazole and Its Hydrogen Bonded Complexes With Water and Methanol. Phys. Chem. A, 2010, vol. 114, pp. 8323-8330.
  • Ishikawa M., Nonoshita K., Ogino Y., Nagae Y., Tsukahara D., Hosaka H., Maruki H., Ohyama S., Yoshimoto R., Sasaki K., Nagata Y., Eiki J., Nishimura T. Discovery of Novel 2-(Pyridine-2-yl)-1HBenzimidazole Derivatives as Potent Glucokinase Activators. Bioorg. Med. Chem. Lett., 2009, vol. 19, pp. 4450-4454.
  • Iyer S.S., Datta A. Microheterogeneity in Native and Cation-Exchanged Nafion Membranes. J. Phys. Chem. B., 2012, vol. 116, pp. 9992-9998.
  • Iyer S.S., Datta A. Influence of External Electrolyte on Ion Exchange in Nafion Membranes. RSC Advances, 2012, vol. 2, pp. 8050-8054.
  • Iyer S.S., Dhrubajyoti S., Dey A., Kundu A., Datta A. 2-(2′ -Pyridyl) Benzimidazole as a Fluorescent Probe of Hydration of Nafion Membranes. Indian J. Chem., 1999, vol. 38A, pp. 1223-1227.
  • Maiore L., Aragoni M.C., Deiana C., Cinellu M.A., Isaia F., Lippolis V., Pintus A., Serratrice M., Arca M. Structure-Activity Relationships in Cytotoxic AuI/AuIII Complexes Derived from 2-(2′-Pyridyl) Benzimidazole. Inorg. Chem., 2014, vol. 53 (8), pp. 4068-4080.
  • Mennucci B., Tomasi J. Continuum Solvation Models: A New Approach to the Problem of Solute’s Charge Distribution and Cavity Boundaries. J. Chem. Phys., 1997, vol. 106, pp. 5151-5158.
  • Schiffmann R., Neugebauer A., Klein C.D. Metal-Mediated Inhibition of Escherichia Coli Methionine Aminopeptidase: Structure Activity Relationships and Development of a Novel Scoring Function for Metal Ligand Interactions. J. Med. Chem., 2006, vol. 49, pp. 511-522.
  • Sontakke V.A., Ghosh S., Lawande P.P. A Simple Efficient Synthesis of 2-Aryl Benzimidazoles Using Silica-Supported Periodic Acid Catalyst and Evaluation of Anticancer Activity. ISRN Organic Chemistry, 2013, vol. 2, p. 7.
  • Thakur P., Chakravortty V., Dash K.C. Synthesis and Characterization of Lanthanide (III) Complexes of 5-Methyl-2-(2′-Pyridyl) Benzimidazole and 2-(2′-Pyridyl) Benzimidazole. Indian Journal of Chemistry, 1999, vol. 38A, pp. 1223-1227.
  • Tsukamoto G., Yoshino K., Kohono T., Ohtaka H., Kagaya H., Ito K. 2-Substituted Azole Derivatives. 1. Synthesis and Anti-Inflammatory Activity of Some 2-(Substituted-Pyridinyl) Benzimidazoles. J. Med. Chem., 1980, vol. 23, pp. 734-738.
  • Walia R., Hedaitullah M., Naaz S.F., Iqbal Kh., Lamba H.S. Benzimidazole Derivatives -an Overview. Int. J. Research Pharm. Chem., 2011, vol. 3(1), pp. 565-574.
  • Wolinski K., Hilton J.F., Pulay P. Efficient Implementation of the Gauge-Independent Atomic Orbital Method for NMR Chemical Shift Calculations. J. Am. Chem. Soc., 1990, vol. 112, pp. 8251-8260.
  • Yeh A., Shih Ch., Lin L., Yang Sh., Chang Ch. Variable-Temperature NMR Studies of 2-(Pyridin-2-yl)-1H-Benzodimidazole. Life Science Journal, 2009, vol. 6 (4), pp. 1-4.
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