Модель эволюционной оценки типов экосистем «паразит-хозяин» на примере хламидий семейства Chlamydiaceae и их естественных хозяев

Автор: Каримов М.З., Вафин Р.Р., Равилов Р.Х.

Журнал: Ученые записки Казанской государственной академии ветеринарной медицины им. Н.Э. Баумана @uchenye-zapiski-ksavm

Статья в выпуске: 2 т.226, 2016 года.

Бесплатный доступ

При анализе эволюции хламидий семейства Chlamydiaceae может быть использована хронологическая связь длины локусов генов, кодирующих синтез белков наружной мембраны (omp1 и omp2) данных микроорганизмов с ходом их эволюционного развития, с возможным уточнением взаимосвязи в последовательности зарождения таксонов паразитов и их хозяев.

Хламидии, паразит, хозяин, эволюция

Короткий адрес: https://sciup.org/14288840

IDR: 14288840

Список литературы Модель эволюционной оценки типов экосистем «паразит-хозяин» на примере хламидий семейства Chlamydiaceae и их естественных хозяев

Andersson, J.O. Insights into the evolutionary process of genome degradation/J.O. Andersson, S.G. Andersson//Curr. Opin. Genet. Dev. -1999. -V. 9. -P. 664-671.
Andersson, S.G. The genome sequence of Rickettsia prowazekiiand the origin of mitochondria/S.G. Andersson, A. Zomorodipour, J.O. Andersson, T. Sicheritz-Ponten, U.C. Alsmark, R.M. Podowski et al.//Nature. -1998. -V. 396. -P. 133-140.
Ashford, R.W. Parasites as indicators of human biology and evolution/R.W. Ashford//J. Med. Microbiol. -2000. -V. 49. -P. 771-772.
Bavoil, P. Role of disulfide bonding in outer membrane structure and permeability in Chlamydia trachomatis/P. Bavoil, A. Ohlin, J. Schachter//Infect. Immun. -1984. -V. 44.-N. 2. -P. 479-485.
Belland, R.J. Chlamydia trachomatis cytotoxicity associated with complete and partial cytotoxin genes/R.J. Belland, M.A. Scidmore, D.D. Crane, D.M. Hogan, W. Whitmire, G. McClarty et al.//PNAS. -2001. -V. 98. -N. 24. -P. 13984-13989.
Berger, L.Chlamydia pneumoniae in a free-ranging giant barred frog (Mixophyesiteratus) from Australia/L. Berger, K. Volp, S. Mathews, R. Speare, P. Timms//J. Clin. Microbiol. -1999. -V. 37. -N. 7. -P. 2378-2380.
Bodetti, T.J.Molecular evidence to support the expansion of the hostrange of Chlamydophila pneumoniae to include reptiles as well as humans, horses, koalas and amphibians/T.J. Bodetti, E. Jacobson, C. Wan, L. Hafner, A. Pospischil, K. Rose et al.//Syst. Appl. Microbiol. -2002. -V. 25. -N. 1. -P. 146-152.
Brunelle, B.W. The ompAGene in Chlamydia trachomatis Differs in Phylogeny and Rate of Evolution from Other Regions of the Genome/B.W. Brunelle, G.F. Sensabaugh//Infect. Immun. -2006. -V. 74. -N. 1. -P. 578-585.
Bush, R.M.Molecular evolution of the Chlamydiaceae/R.M. Bush, K.D. Everett//Int. J. Syst. Evol. Microbiol. -2001. -V. 51. -P. 203-220.
Caldwell, H.D.Polymorphisms in Chlamydia trachomatis tryptophan synthase genes differentiate between genital and ocular isolates/H.D. Caldwell, H. Wood, D. Crane, R. Bailey, R.B. Jones, D. Mabey et al.//J. Clin. Invest. 2003. -V. 111. -N. 11. -P. 1757-1769.
Canderle, J.Chlamydophila pneumoniae antibodies in Swine/J. Canderle, L Pospisil, H. Stroblova, Z. Veznik//ACTA VET. BRNO. -2005. -V. 74. -P. 81-86.
Cavalier-Smith, T. Economy, speed and size matter: evolutionary forces driving nuclear genome miniaturization and expansion/T. Cavalier-Smith//Ann. Bot. (Lond.). -2005. -V. 95 -N. 1. -P. 147-75.
Devereaux, L.N.Molecular evidence for novel chlamydial infections in the koala (Phascolarctoscinereus)/L.N. Devereaux, A. Polkinghorne, A. Meijer, P. Timms//Syst. Appl. Microbiol. -2003. -V. 26. -N. 2. -P. 245-253.
Dufresne, A. Accelerated evolution associated with genome reduction in a free-living prokaryote/A. Dufresne, L. Garczarek, F. Partensky//Genome Biol. -2005. -V. 6. -N. 2. -R. 14.
Fahrenholz. H. Ectoparasiten und Abstammungslehre/H. Fahrenholz//Zool. Anz. (Leipzig). -1913. -V. 41. -P. 371-373.
Hafner, M.S. Phylogenetic trees support the coevolution of parasites and their hosts/M.S. Hafner, S.A. Nadler//Nature. -1988. -V. 332. -P. 258-259.
Hartley, J.C. PCR detection and molecular identification of Chlamydiaceae species/J.C. Hartley, S. Kaye, S. Stevenson, J. Bennett, G. Ridgway//J. Clin. Microbiol.-2001. -V. 39 -N. 9. -P. 3072-3079.
Kaltenboeck, B. Structures of and allelic diversity and relationships among the major outer membrane protein (ompA) genes of the four chlamydial species/B. Kaltenboeck, K.G. Kousoulas, J. Storz//J. Bacteriol. -1993. -V. 175. -N. 2. -P. 487-502.
Lawrence, J.G. Molecular and evolutionary relationships among enteric bacteria/J.G. Lawrence, H. Ochman, D. Hartl//J. Gen. Microbiol. -1991. -V. 137. -P. 1911-1921.
Liuba, P. Acute Chlamydia pneumoniae infection causes coronary endothelial dysfunction in pigs/P. Liuba, E. Pesonen, L. Paakkari, S. Batra, A. Forslid, P. Kovanen et al.//Atherosclerosis. -2003. -V. 167. -N. 2. -P. 215-222.
Millman, K.L. Recombination in the ompA gene but not the omcB gene of Chlamydia contributes to serovar-specific differences in tissue tropism, immune surveillance, and persistence of the organism/K.L. Millman, S. Tavare, D. Dean//J. Bacteriol. -2001. -V. 183. -N. 20. -P. 5997-6008.
Mygind, P. Analysis of the humoral immune response to Chlamydia outer membrane protein 2/P. Mygind, G. Christiansen, K. Persson, S. Birkelund//Clin. Diagn. Lab. Immunol. -1998. -V. 5. -N. 3.-P. 313-318.
Paterson, A.M.Analytical approaches to measuring cospeciation of host and parasites: through a glass, darkly/A.M. Paterson, J. Banks//International Journal for Parasitology. -2001. -V. 31. -P. 1012-1022.
Petrov, D.A. DNA loss and evolution of genome size in Drosophila/D.A. Petrov//Genetica. -2002. -V. 115. -P. 81-91.
Read, T.D. Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39/T.D. Read, R.C. Brunham, C. Shen, S.R. Gill, J.F. Heidelberg, O. White et al.//Nucleic Acids Res. -2000. -V. 28. -N. 6. -P. 1397-1406.
Sakharkar, K.R. Strategies for genome reduction in microbial genomes/K.R. Sakharkar, V.T. Chow//Genome Inform.-2005. -V. 16. -N. 2. -P. 69-75.
Sako, T. Chlamydial infection in canine atherosclerotic lesions/T. Sako, T. Takahashi, K. Takehana, E. Uchida, T. Nakade, T. Umemura et al.//Atherosclerosis. -2002. -V. 162. -N. 2. -P. 253-259.
Stothard, D.R. Phylogenetic Analysis of the Chlamydia trachomatis Major Outer Membrane Protein and Examination of Potential Pathogenic Determinants/D.R. Stothard, G. Boguslawski, R.B. Jones//Infect. Immun. -1998. -V. 66. -N. 8. -P. 3618-3625.
Schneider, A. Covariation of mitochondrial genome size with gene lengths: evidence for gene length reduction during mitochondrial evolution/A. Schneider, D. Ebert//J. Mol. Evol. -2004. -V. 59. -N. 1.-P. 90-96.
Schwab, I.R. Colour me ultraviolet/I.R. Schwab, C.A. Arrese//British Journal of Ophthalmology. -2005. -V. 89. -P. 399.
Thomas, J.W. Comparative analyses of multi-species sequences from targeted genomic regions/J.W. Thomas, J.W. Touchman, R.W. Blakesley, G.G. Bouffard, S.M. Beckstrom-Sternberg, E.H. Margulies et al.//Nature. -2003. -V. 424. -P. 788-793.
Van Loock, M. Missing links in the divergence of Chlamydophilaabortus from Chlamydophilapsittaci/M. Van Loock, D. Vanrompay, B. Herrmann, J. Vander Stappen, G. Volckaert, B.M. Goddeeris et al.//Int. J. Syst. Evol. Microbiol. -2003. -V. 53. -P. 761-770.
Woese. C.R. Bacterial evolution/C.R. Woese//Microbiol. Rev. -1987. -V. 51. -P. 221-271.
Zomorodipour, A. Obligate intracellular parasites: Rickettsia prowazekii and Chlamydia trachomatis/A. Zomorodipour, S.G. Andersson//FEBS Lett. -1999. -V. 452. -P. 11-15.

Еще

Статья научная